Library Reference¶

Record (`moclo.record`)¶

CircularRecord

A derived SeqRecord that contains a circular DNA sequence.

Registry (`moclo.registry.base`)¶

`Item`	A uniquely identified record in a registry.
`AbstractRegistry`	An abstract registry holding MoClo plasmids.
`CombinedRegistry`	A registry combining several registries into a single collection.
`EmbeddedRegistry`	An embedded registry, distributed with the library source code.

Modules (`moclo.core.modules`)¶

`AbstractModule`	An abstract modular cloning module.
`Entry`	A level 0 module, often obtained from the official toolkits plamisds.
`Cassette`	A level 1 module, also refered as a Transcriptional Unit.
`Device`	A level 2 module, also refered as a Multigene plasmid.

Vectors (`moclo.core.vectors`)¶

`AbstractVector`	An abstract modular cloning vector.
`EntryVector`	Level 0 vector.
`CassetteVector`	Level 1 vector.
`DeviceVector`	Level 2 vector.

Parts (`moclo.core.parts`)¶

An abstract modular cloning part.

Errors (`moclo.errors`)¶

Base classes

`MocloError`	Base class for all MoClo-related exceptions.
`AssemblyError`	Assembly-specific run-time error.
`AssemblyWarning`	Assembly-specific run-time warning.

Errors

`DuplicateModules`	Several modules share the same overhangs.
`InvalidSequence`	Invalid sequence provided.
`IllegalSite`	Sequence with illegal site provided.
`MissingModule`	A module is missing in the assembly.

Warnings

UnusedModules

Not all modules were used during assembly.