Errors¶

Base classes¶

class moclo.errors.MocloError(Exception)[source]¶: Base class for all MoClo-related exceptions.

class moclo.errors.AssemblyError(MocloError, RuntimeError)[source]¶: Assembly-specific run-time error.

class moclo.errors.AssemblyWarning(MocloError, Warning)[source]¶

Assembly-specific run-time warning.

Warnings can be turned into errors using the warnings.catch_warnings decorator combined to warnings.simplefilter with action set to "error".

Errors¶

class moclo.errors.DuplicateModules(AssemblyError)[source]¶: Several modules share the same overhangs.

class moclo.errors.InvalidSequence(MocloError, ValueError)[source]¶: Invalid sequence provided.

class moclo.errors.IllegalSite(InvalidSequence)[source]¶: Sequence with illegal site provided.

class moclo.errors.MissingModule(AssemblyError)[source]¶: A module is missing in the assembly.

Warnings¶

class moclo.errors.UnusedModules(AssemblyWarning)[source]¶: Not all modules were used during assembly.