moclo
0.4.7
GitHub
Bug Reports
Addgene Guide
Documentation
Concepts
Definitions
Descriptive Theory
Installation
Examples
Library Reference
Changelogs
About
MoClo Kit
Plant Parts Kit
CIDAR Kit
EcoFlex Kit
Yeast ToolKit (YTK) / Pichia ToolKit (PTK)
Index
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A
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C
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D
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E
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I
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M
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O
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P
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R
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S
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T
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U
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Y
_
__add__() (moclo.record.CircularRecord method)
__contains__() (moclo.record.CircularRecord method)
__getitem__() (moclo.record.CircularRecord method)
__init__() (moclo.core.modules.AbstractModule method)
(moclo.core.parts.AbstractPart method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.moclo.MoCloCassetteVector method)
(moclo.kits.moclo.MoCloEntry method)
(moclo.kits.moclo.MoCloEntryVector method)
(moclo.kits.moclo.MoCloProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
(moclo.record.CircularRecord method)
(moclo.registry.base.CombinedRegistry method)
__lshift__() (moclo.record.CircularRecord method)
__radd__() (moclo.record.CircularRecord method)
__rshift__() (moclo.record.CircularRecord method)
A
AbstractModule (class in moclo.core.modules)
AbstractPart (class in moclo.core.parts)
AbstractRegistry (class in moclo.registry.base)
AbstractVector (class in moclo.core.vectors)
assemble() (moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.moclo.MoCloCassetteVector method)
(moclo.kits.moclo.MoCloEntryVector method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntryVector method)
AssemblyError (class in moclo.errors)
AssemblyWarning (class in moclo.errors)
C
Cassette (class in moclo.core.modules)
CassetteVector (class in moclo.core.vectors)
characterize() (moclo.core.parts.AbstractPart class method)
CIDARCassette (class in moclo.kits.cidar)
CIDARCassetteVector (class in moclo.kits.cidar)
CIDARCodingSequence (class in moclo.kits.cidar)
CIDARDevice (class in moclo.kits.cidar)
CIDARDeviceVector (class in moclo.kits.cidar)
CIDAREntry (class in moclo.kits.cidar)
CIDAREntryVector (class in moclo.kits.cidar)
CIDARProduct (class in moclo.kits.cidar)
CIDARPromoter (class in moclo.kits.cidar)
CIDARRibosomeBindingSite (class in moclo.kits.cidar)
CIDARTerminator (class in moclo.kits.cidar)
CircularRecord (class in moclo.record)
CombinedRegistry (class in moclo.registry.base)
cutter (moclo.core.modules.AbstractModule attribute)
(moclo.kits.cidar.CIDARCassette attribute)
(moclo.kits.cidar.CIDARCassetteVector attribute)
(moclo.kits.cidar.CIDARDevice attribute)
(moclo.kits.cidar.CIDARDeviceVector attribute)
(moclo.kits.cidar.CIDAREntry attribute)
(moclo.kits.cidar.CIDAREntryVector attribute)
(moclo.kits.cidar.CIDARProduct attribute)
(moclo.kits.ecoflex.EcoFlexCassette attribute)
(moclo.kits.ecoflex.EcoFlexCassetteVector attribute)
(moclo.kits.ecoflex.EcoFlexDevice attribute)
(moclo.kits.ecoflex.EcoFlexDeviceVector attribute)
(moclo.kits.ecoflex.EcoFlexEntry attribute)
(moclo.kits.moclo.MoCloCassette attribute)
(moclo.kits.moclo.MoCloCassetteVector attribute)
(moclo.kits.moclo.MoCloDeviceVector attribute)
(moclo.kits.moclo.MoCloEntry attribute)
(moclo.kits.moclo.MoCloEntryVector attribute)
(moclo.kits.moclo.MoCloLevelMVector attribute)
(moclo.kits.moclo.MoCloLevelPEndLinker attribute)
(moclo.kits.moclo.MoCloLevelPVector attribute)
(moclo.kits.moclo.MoCloProduct attribute)
(moclo.kits.ytk.YTKCassette attribute)
(moclo.kits.ytk.YTKCassetteVector attribute)
(moclo.kits.ytk.YTKDeviceVector attribute)
(moclo.kits.ytk.YTKEntry attribute)
(moclo.kits.ytk.YTKEntryVector attribute)
(moclo.kits.ytk.YTKProduct attribute)
D
Device (class in moclo.core.modules)
DeviceVector (class in moclo.core.vectors)
DuplicateModules (class in moclo.errors)
E
EcoFlexCassette (class in moclo.kits.ecoflex)
EcoFlexCassetteVector (class in moclo.kits.ecoflex)
EcoFlexCodingSequence (class in moclo.kits.ecoflex)
EcoFlexDevice (class in moclo.kits.ecoflex)
EcoFlexDeviceVector (class in moclo.kits.ecoflex)
EcoFlexEntry (class in moclo.kits.ecoflex)
EcoFlexPromoter (class in moclo.kits.ecoflex)
EcoFlexRBS (class in moclo.kits.ecoflex)
EcoFlexTag (class in moclo.kits.ecoflex)
EcoFlexTagLinker (class in moclo.kits.ecoflex)
EcoFlexTerminator (class in moclo.kits.ecoflex)
EmbeddedRegistry (class in moclo.registry.base)
Entry (class in moclo.core.modules)
EntryVector (class in moclo.core.vectors)
I
IllegalSite (class in moclo.errors)
InvalidSequence (class in moclo.errors)
is_valid() (moclo.core.modules.AbstractModule method)
(moclo.core.parts.AbstractPart method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.moclo.MoCloCassetteVector method)
(moclo.kits.moclo.MoCloEntry method)
(moclo.kits.moclo.MoCloEntryVector method)
(moclo.kits.moclo.MoCloProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
M
MissingModule (class in moclo.errors)
moclo.core.modules
module
moclo.core.parts
module
moclo.core.vectors
module
moclo.errors
module
moclo.kits.cidar
module
moclo.kits.ecoflex
module
moclo.kits.moclo
module
moclo.kits.plant
module
moclo.kits.ytk
module
moclo.record
module
moclo.registry.base
module
MoClo3U (class in moclo.kits.moclo)
MoClo3UTer (class in moclo.kits.moclo)
MoClo5U (class in moclo.kits.moclo)
MoClo5Uf (class in moclo.kits.moclo)
MoCloCassette (class in moclo.kits.moclo)
MoCloCassetteVector (class in moclo.kits.moclo)
MoCloCDS1 (class in moclo.kits.moclo)
MoCloCDS1ns (class in moclo.kits.moclo)
MoCloCDS2 (class in moclo.kits.moclo)
MoCloCDS2ns (class in moclo.kits.moclo)
MoCloCTag (class in moclo.kits.moclo)
MoCloDeviceVector (class in moclo.kits.moclo)
MoCloEndLinker (class in moclo.kits.moclo)
MoCloEntry (class in moclo.kits.moclo)
MoCloEntryVector (class in moclo.kits.moclo)
MocloError (class in moclo.errors)
MoCloGene (class in moclo.kits.moclo)
MoCloLevelMEndLinker (class in moclo.kits.moclo)
MoCloLevelMVector (class in moclo.kits.moclo)
MoCloLevelPEndLinker (class in moclo.kits.moclo)
MoCloLevelPVector (class in moclo.kits.moclo)
MoCloNTag (class in moclo.kits.moclo)
MoCloPro (class in moclo.kits.moclo)
MoCloPro5U (class in moclo.kits.moclo)
MoCloPro5Uf (class in moclo.kits.moclo)
MoCloProduct (class in moclo.kits.moclo)
MoCloSP (class in moclo.kits.moclo)
MoCloTer (class in moclo.kits.moclo)
module
moclo.core.modules
moclo.core.parts
moclo.core.vectors
moclo.errors
moclo.kits.cidar
moclo.kits.ecoflex
moclo.kits.moclo
moclo.kits.plant
moclo.kits.ytk
moclo.record
moclo.registry.base
O
overhang_end() (moclo.core.modules.AbstractModule method)
(moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.moclo.MoCloCassetteVector method)
(moclo.kits.moclo.MoCloEntry method)
(moclo.kits.moclo.MoCloEntryVector method)
(moclo.kits.moclo.MoCloProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
overhang_start() (moclo.core.modules.AbstractModule method)
(moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.moclo.MoCloCassetteVector method)
(moclo.kits.moclo.MoCloEntry method)
(moclo.kits.moclo.MoCloEntryVector method)
(moclo.kits.moclo.MoCloProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
P
placeholder_sequence() (moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.moclo.MoCloCassetteVector method)
(moclo.kits.moclo.MoCloEntryVector method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntryVector method)
Product (class in moclo.core.modules)
R
reverse_complement() (moclo.record.CircularRecord method)
S
structure() (moclo.core.modules.AbstractModule class method)
(moclo.core.parts.AbstractPart class method)
(moclo.core.vectors.AbstractVector class method)
(moclo.kits.cidar.CIDARCassetteVector static method)
(moclo.kits.cidar.CIDARDeviceVector static method)
(moclo.kits.cidar.CIDAREntry class method)
(moclo.kits.cidar.CIDAREntryVector static method)
(moclo.kits.cidar.CIDARProduct class method)
(moclo.kits.ecoflex.EcoFlexCassetteVector static method)
(moclo.kits.ecoflex.EcoFlexDeviceVector static method)
(moclo.kits.ecoflex.EcoFlexEntry class method)
(moclo.kits.moclo.MoCloCassetteVector class method)
(moclo.kits.moclo.MoCloEntry class method)
(moclo.kits.moclo.MoCloEntryVector class method)
(moclo.kits.moclo.MoCloLevelMEndLinker class method)
(moclo.kits.moclo.MoCloLevelMVector class method)
(moclo.kits.moclo.MoCloLevelPEndLinker class method)
(moclo.kits.moclo.MoCloLevelPVector class method)
(moclo.kits.moclo.MoCloProduct class method)
(moclo.kits.ytk.YTKCassetteVector class method)
(moclo.kits.ytk.YTKEntry class method)
(moclo.kits.ytk.YTKEntryVector class method)
(moclo.kits.ytk.YTKProduct static method)
T
target_sequence() (moclo.core.modules.AbstractModule method)
(moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.moclo.MoCloCassetteVector method)
(moclo.kits.moclo.MoCloEntry method)
(moclo.kits.moclo.MoCloEntryVector method)
(moclo.kits.moclo.MoCloProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
U
UnusedModules (class in moclo.errors)
Y
YTKCassette (class in moclo.kits.ytk)
YTKCassetteVector (class in moclo.kits.ytk)
YTKDeviceVector (class in moclo.kits.ytk)
YTKEntry (class in moclo.kits.ytk)
YTKEntryVector (class in moclo.kits.ytk)
YTKPart1 (class in moclo.kits.ytk)
YTKPart2 (class in moclo.kits.ytk)
YTKPart234 (class in moclo.kits.ytk)
YTKPart234r (class in moclo.kits.ytk)
YTKPart3 (class in moclo.kits.ytk)
YTKPart3a (class in moclo.kits.ytk)
YTKPart3b (class in moclo.kits.ytk)
YTKPart4 (class in moclo.kits.ytk)
YTKPart4a (class in moclo.kits.ytk)
YTKPart4b (class in moclo.kits.ytk)
YTKPart5 (class in moclo.kits.ytk)
YTKPart6 (class in moclo.kits.ytk)
YTKPart678 (class in moclo.kits.ytk)
YTKPart7 (class in moclo.kits.ytk)
YTKPart8 (class in moclo.kits.ytk)
YTKPart8a (class in moclo.kits.ytk)
YTKPart8b (class in moclo.kits.ytk)
YTKProduct (class in moclo.kits.ytk)