moclo
0.4.5
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Changelog
Addgene Guide
Documentation
Concepts
Definitions
Descriptive Theory
Installation
Examples
Library Reference
Changelogs
About
CIDAR Kit
EcoFlex Kit
Icon Genetics Kit
Yeast ToolKit (YTK) / Pichia ToolKit (PTK)
Index
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A
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C
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D
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E
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I
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M
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O
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P
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R
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S
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T
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U
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Y
_
__add__() (moclo.record.CircularRecord method)
__contains__() (moclo.record.CircularRecord method)
__getitem__() (moclo.record.CircularRecord method)
__init__() (moclo.core.modules.AbstractModule method)
(moclo.core.parts.AbstractPart method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.ig.IGCassetteVector method)
(moclo.kits.ig.IGEntry method)
(moclo.kits.ig.IGEntryVector method)
(moclo.kits.ig.IGProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
(moclo.record.CircularRecord method)
(moclo.registry.base.CombinedRegistry method)
__lshift__() (moclo.record.CircularRecord method)
__radd__() (moclo.record.CircularRecord method)
__rshift__() (moclo.record.CircularRecord method)
A
AbstractModule (class in moclo.core.modules)
AbstractPart (class in moclo.core.parts)
AbstractRegistry (class in moclo.registry.base)
AbstractVector (class in moclo.core.vectors)
assemble() (moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ig.IGCassetteVector method)
(moclo.kits.ig.IGEntryVector method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntryVector method)
AssemblyError (class in moclo.errors)
AssemblyWarning (class in moclo.errors)
C
Cassette (class in moclo.core.modules)
CassetteVector (class in moclo.core.vectors)
characterize() (moclo.core.parts.AbstractPart class method)
CIDARCassette (class in moclo.kits.cidar)
CIDARCassetteVector (class in moclo.kits.cidar)
CIDARCodingSequence (class in moclo.kits.cidar)
CIDARDevice (class in moclo.kits.cidar)
CIDARDeviceVector (class in moclo.kits.cidar)
CIDAREntry (class in moclo.kits.cidar)
CIDAREntryVector (class in moclo.kits.cidar)
CIDARProduct (class in moclo.kits.cidar)
CIDARPromoter (class in moclo.kits.cidar)
CIDARRibosomeBindingSite (class in moclo.kits.cidar)
CIDARTerminator (class in moclo.kits.cidar)
CircularRecord (class in moclo.record)
CombinedRegistry (class in moclo.registry.base)
cutter (moclo.core.modules.AbstractModule attribute)
(moclo.kits.cidar.CIDARCassette attribute)
(moclo.kits.cidar.CIDARCassetteVector attribute)
(moclo.kits.cidar.CIDARDevice attribute)
(moclo.kits.cidar.CIDARDeviceVector attribute)
(moclo.kits.cidar.CIDAREntry attribute)
(moclo.kits.cidar.CIDAREntryVector attribute)
(moclo.kits.cidar.CIDARProduct attribute)
(moclo.kits.ecoflex.EcoFlexCassette attribute)
(moclo.kits.ecoflex.EcoFlexCassetteVector attribute)
(moclo.kits.ecoflex.EcoFlexDevice attribute)
(moclo.kits.ecoflex.EcoFlexDeviceVector attribute)
(moclo.kits.ecoflex.EcoFlexEntry attribute)
(moclo.kits.ig.IGCassette attribute)
(moclo.kits.ig.IGCassetteVector attribute)
(moclo.kits.ig.IGDeviceVector attribute)
(moclo.kits.ig.IGEntry attribute)
(moclo.kits.ig.IGEntryVector attribute)
(moclo.kits.ig.IGLevelMVector attribute)
(moclo.kits.ig.IGLevelPEndLinker attribute)
(moclo.kits.ig.IGLevelPVector attribute)
(moclo.kits.ig.IGProduct attribute)
(moclo.kits.ytk.YTKCassette attribute)
(moclo.kits.ytk.YTKCassetteVector attribute)
(moclo.kits.ytk.YTKDeviceVector attribute)
(moclo.kits.ytk.YTKEntry attribute)
(moclo.kits.ytk.YTKEntryVector attribute)
(moclo.kits.ytk.YTKProduct attribute)
D
Device (class in moclo.core.modules)
DeviceVector (class in moclo.core.vectors)
DuplicateModules (class in moclo.errors)
E
EcoFlexCassette (class in moclo.kits.ecoflex)
EcoFlexCassetteVector (class in moclo.kits.ecoflex)
EcoFlexCodingSequence (class in moclo.kits.ecoflex)
EcoFlexDevice (class in moclo.kits.ecoflex)
EcoFlexDeviceVector (class in moclo.kits.ecoflex)
EcoFlexEntry (class in moclo.kits.ecoflex)
EcoFlexPromoter (class in moclo.kits.ecoflex)
EcoFlexRBS (class in moclo.kits.ecoflex)
EcoFlexTag (class in moclo.kits.ecoflex)
EcoFlexTagLinker (class in moclo.kits.ecoflex)
EcoFlexTerminator (class in moclo.kits.ecoflex)
EmbeddedRegistry (class in moclo.registry.base)
Entry (class in moclo.core.modules)
EntryVector (class in moclo.core.vectors)
I
IGCassette (class in moclo.kits.ig)
IGCassetteVector (class in moclo.kits.ig)
IGCodingSequence (class in moclo.kits.ig)
IGDeviceVector (class in moclo.kits.ig)
IGEndLinker (class in moclo.kits.ig)
IGEntry (class in moclo.kits.ig)
IGEntryVector (class in moclo.kits.ig)
IGLevelMEndLinker (class in moclo.kits.ig)
IGLevelMVector (class in moclo.kits.ig)
IGLevelPEndLinker (class in moclo.kits.ig)
IGLevelPVector (class in moclo.kits.ig)
IGProduct (class in moclo.kits.ig)
IGPromoter (class in moclo.kits.ig)
IGSignalPeptide (class in moclo.kits.ig)
IGTerminator (class in moclo.kits.ig)
IGUntranslatedRegion (class in moclo.kits.ig)
IllegalSite (class in moclo.errors)
InvalidSequence (class in moclo.errors)
is_valid() (moclo.core.modules.AbstractModule method)
(moclo.core.parts.AbstractPart method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.ig.IGCassetteVector method)
(moclo.kits.ig.IGEntry method)
(moclo.kits.ig.IGEntryVector method)
(moclo.kits.ig.IGProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
M
MissingModule (class in moclo.errors)
moclo.core.modules (module)
moclo.core.parts (module)
moclo.core.vectors (module)
moclo.errors (module)
moclo.kits.cidar (module)
moclo.kits.ecoflex (module)
moclo.kits.ig (module)
moclo.kits.ytk (module)
moclo.record (module)
moclo.registry.base (module)
MocloError (class in moclo.errors)
O
overhang_end() (moclo.core.modules.AbstractModule method)
(moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.ig.IGCassetteVector method)
(moclo.kits.ig.IGEntry method)
(moclo.kits.ig.IGEntryVector method)
(moclo.kits.ig.IGProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
overhang_start() (moclo.core.modules.AbstractModule method)
(moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.ig.IGCassetteVector method)
(moclo.kits.ig.IGEntry method)
(moclo.kits.ig.IGEntryVector method)
(moclo.kits.ig.IGProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
P
placeholder_sequence() (moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ig.IGCassetteVector method)
(moclo.kits.ig.IGEntryVector method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntryVector method)
Product (class in moclo.core.modules)
R
reverse_complement() (moclo.record.CircularRecord method)
S
structure() (moclo.core.modules.AbstractModule class method)
(moclo.core.parts.AbstractPart class method)
(moclo.core.vectors.AbstractVector class method)
(moclo.kits.cidar.CIDARCassetteVector static method)
(moclo.kits.cidar.CIDARDeviceVector static method)
(moclo.kits.cidar.CIDAREntry class method)
(moclo.kits.cidar.CIDAREntryVector static method)
(moclo.kits.cidar.CIDARProduct class method)
(moclo.kits.ecoflex.EcoFlexCassetteVector static method)
(moclo.kits.ecoflex.EcoFlexDeviceVector static method)
(moclo.kits.ecoflex.EcoFlexEntry class method)
(moclo.kits.ig.IGCassetteVector class method)
(moclo.kits.ig.IGEntry class method)
(moclo.kits.ig.IGEntryVector class method)
(moclo.kits.ig.IGLevelMEndLinker class method)
(moclo.kits.ig.IGLevelMVector class method)
(moclo.kits.ig.IGLevelPEndLinker class method)
(moclo.kits.ig.IGLevelPVector class method)
(moclo.kits.ig.IGProduct class method)
(moclo.kits.ytk.YTKCassetteVector class method)
(moclo.kits.ytk.YTKEntry class method)
(moclo.kits.ytk.YTKEntryVector class method)
(moclo.kits.ytk.YTKProduct static method)
T
target_sequence() (moclo.core.modules.AbstractModule method)
(moclo.core.vectors.AbstractVector method)
(moclo.kits.cidar.CIDARCassetteVector method)
(moclo.kits.cidar.CIDAREntry method)
(moclo.kits.cidar.CIDAREntryVector method)
(moclo.kits.cidar.CIDARProduct method)
(moclo.kits.ecoflex.EcoFlexCassetteVector method)
(moclo.kits.ecoflex.EcoFlexEntry method)
(moclo.kits.ig.IGCassetteVector method)
(moclo.kits.ig.IGEntry method)
(moclo.kits.ig.IGEntryVector method)
(moclo.kits.ig.IGProduct method)
(moclo.kits.ytk.YTKCassetteVector method)
(moclo.kits.ytk.YTKEntry method)
(moclo.kits.ytk.YTKEntryVector method)
(moclo.kits.ytk.YTKProduct method)
U
UnusedModules (class in moclo.errors)
Y
YTKCassette (class in moclo.kits.ytk)
YTKCassetteVector (class in moclo.kits.ytk)
YTKDeviceVector (class in moclo.kits.ytk)
YTKEntry (class in moclo.kits.ytk)
YTKEntryVector (class in moclo.kits.ytk)
YTKPart1 (class in moclo.kits.ytk)
YTKPart2 (class in moclo.kits.ytk)
YTKPart234 (class in moclo.kits.ytk)
YTKPart234r (class in moclo.kits.ytk)
YTKPart3 (class in moclo.kits.ytk)
YTKPart3a (class in moclo.kits.ytk)
YTKPart3b (class in moclo.kits.ytk)
YTKPart4 (class in moclo.kits.ytk)
YTKPart4a (class in moclo.kits.ytk)
YTKPart4b (class in moclo.kits.ytk)
YTKPart5 (class in moclo.kits.ytk)
YTKPart6 (class in moclo.kits.ytk)
YTKPart678 (class in moclo.kits.ytk)
YTKPart7 (class in moclo.kits.ytk)
YTKPart8 (class in moclo.kits.ytk)
YTKPart8a (class in moclo.kits.ytk)
YTKPart8b (class in moclo.kits.ytk)
YTKProduct (class in moclo.kits.ytk)